<?xml version="1.0" encoding="utf-8" ?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom" xmlns:r="https://r-universe.dev"><channel><title>zachpwakefield.r-universe.dev</title><link>https://zachpwakefield.r-universe.dev</link><description>Recent package updates in zachpwakefield</description><generator>R-universe</generator><image><url>https://github.com/zachpwakefield.png</url><title>R packages by zachpwakefield</title><link>https://zachpwakefield.r-universe.dev</link></image><lastBuildDate>Fri, 09 Oct 2026 02:19:03 GMT</lastBuildDate><item><title>[bioc] SpliceImpactR 1.1.4</title><author>zachpw@bu.edu (Zachary Wakefield)</author><description>Works by taking in processed data from the HIT Index
and/or rMATS and identifying how differentially used
alternative RNA processing events lead to changes in protein
function through various means. Primarily this is done through
protein similarity, functional protein domain analysis, and
domain-domain interaction changes. Notably, we both identify
alterantive RNA processing event 'swaps' across condition and
are able to perform holistic analyses regarding the impact of
different RNA processing events.</description><link>https://github.com/r-universe/bioc/actions/runs/37910387383</link><pubDate>Fri, 09 Oct 2026 02:19:03 GMT</pubDate><r:package>SpliceImpactR</r:package><r:version>1.1.4</r:version><r:status>success</r:status><r:repository>https://bioc.r-universe.dev</r:repository><r:upstream>https://github.com/bioc/SpliceImpactR</r:upstream><r:article><r:source>transcript_pair_ranking.Rmd</r:source><r:filename>transcript_pair_ranking.html</r:filename><r:title>ORF-aware transcript-pair selection</r:title><r:created>2026-10-08 05:02:49</r:created><r:modified>2026-10-08 06:31:01</r:modified></r:article><r:article><r:source>SpliceImpactR.Rmd</r:source><r:filename>SpliceImpactR.html</r:filename><r:title>SpliceImpactR</r:title><r:created>2025-11-11 18:26:47</r:created><r:modified>2026-10-09 02:19:03</r:modified></r:article></item></channel></rss>